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RB2654_14775 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_14775" - Histone deacetylase family protein in Maritimibacter alkaliphilus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_14775Histone deacetylase family protein (311 aa)    
Predicted Functional Partners:
RB2654_14765
Geranylgeranyl pyrophosphate synthetase (286 aa)
   
        0.899
xseB
Exodeoxyribonuclease VII small subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (80 aa)
         
  0.899
dxs
1-deoxyxylulose-5-phosphate synthase ; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (648 aa)
              0.897
RB2654_09079
Acetyltransferase, GNAT family protein (893 aa)
 
 
  0.794
RB2654_17961
NAD-dependent deacetylase (228 aa)
   
  0.757
RB2654_14795
Putative 3-deoxy-D-manno-octulosonic-acid transferase (427 aa)
              0.669
lpxK
Lipid A 4’-kinase ; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (320 aa)
              0.669
RB2654_14800
Uncharacterized protein (80 aa)
              0.667
mutS
DNA mismatch repair protein MutS ; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (874 aa)
   
      0.628
RB2654_22563
Cytosine-specific methyltransferase (336 aa)
     
  0.550
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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