STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12559.1COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein. (311 aa)    
Predicted Functional Partners:
EAQ14402.1
Amine oxidase, flavin-containing; COG1231 Monoamine oxidase.
    
 0.972
EAQ10957.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
    
 0.890
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.849
EAQ12557.1
COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.840
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.820
EAQ14255.1
ATPase, AFG1 family protein; COG1485 Predicted ATPase.
      0.800
EAQ12811.1
COG0464 ATPases of the AAA+ class.
   
 0.783
EAQ14556.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
   
 0.783
EAQ12143.1
Putative intracellular protease, PfpI family protein; COG0693 Putative intracellular protease/amidase.
    
  0.716
EAQ13210.1
Acetyltransferase, GNAT family protein; COG1042 Acyl-CoA synthetase (NDP forming).
 
     0.647
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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