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RB2654_15425 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_15425" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_15425Uncharacterized protein (399 aa)    
Predicted Functional Partners:
RB2654_15430
Uncharacterized protein (80 aa)
              0.859
RB2654_15435
Uncharacterized protein (62 aa)
              0.676
RB2654_04511
Acyltransferase, putative (276 aa)
 
          0.515
RB2654_08567
Pseudouridine synthase (293 aa)
     
      0.492
RB2654_01130
Pseudouridine synthase (181 aa)
     
      0.492
RB2654_23198
Uncharacterized protein (197 aa)
              0.435
RB2654_22003
Uncharacterized protein (198 aa)
              0.435
RB2654_18313
30S ribosomal protein S1 ; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (554 aa)
              0.435
cmk
Cytidine monophosphate kinase (203 aa)
              0.435
RB2654_16921
Phospholipid/glycerol acyltransferase (218 aa)
              0.435
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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