STRINGSTRING
RB2654_15676 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_15676" - Transmembrane amino acid efflux protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_15676Transmembrane amino acid efflux protein (207 aa)    
Predicted Functional Partners:
RB2654_15671
Uncharacterized protein (121 aa)
 
          0.881
RB2654_15666
Uncharacterized protein (149 aa)
              0.860
RB2654_15681
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (215 aa)
              0.737
RB2654_12869
Transporter, LysE family protein (206 aa)
 
          0.639
RB2654_15661
Acetyl-CoA C-acetyltransferase (392 aa)
              0.639
RB2654_19793
Membrane protein, putative (307 aa)
   
          0.495
RB2654_15656
Anti-sigma factor antagonist (114 aa)
              0.483
RB2654_03944
Putative Acetyltransferase (153 aa)
 
        0.451
RB2654_07486
Uncharacterized protein (2260 aa)
   
          0.406
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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