STRINGSTRING
RB2654_16481 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_16481" - Peptidase U7 in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_16481Peptidase U7 (855 aa)    
Predicted Functional Partners:
RB2654_16486
Uncharacterized protein (490 aa)
 
          0.976
RB2654_16496
Putative phage terminase large subunit (395 aa)
 
          0.939
RB2654_16476
Uncharacterized protein (110 aa)
 
          0.893
RB2654_16501
Putative phage terminase large subunit (267 aa)
 
          0.891
RB2654_16491
Uncharacterized protein (67 aa)
              0.859
RB2654_10393
DNA polymerase I (932 aa)
   
   
  0.651
RB2654_16471
Uncharacterized protein (107 aa)
              0.619
RB2654_16466
Uncharacterized protein (56 aa)
              0.619
RB2654_16461
Uncharacterized protein (143 aa)
              0.619
RB2654_16456
Uncharacterized protein (129 aa)
              0.555
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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