STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ14390.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
EAQ12024.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
  
     0.757
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.725
EAQ13684.1
COG2927 DNA polymerase III, chi subunit.
  
     0.705
EAQ14388.1
Chaperonin csaA; COG0073 EMAP domain.
       0.692
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.692
EAQ14086.1
COG4395 Uncharacterized protein conserved in bacteria.
  
     0.689
EAQ11946.1
COG3750 Uncharacterized protein conserved in bacteria.
  
     0.654
nusB
Putative N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
     0.640
EAQ13567.1
COG3814 Uncharacterized protein conserved in bacteria.
  
     0.625
EAQ11260.1
Thiamine-phosphate pyrophosphorylase, putative; COG0352 Thiamine monophosphate synthase.
  
     0.575
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.