STRINGSTRING
RB2654_17386 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_17386" - Aspartate aminotransferase in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_17386Aspartate aminotransferase (394 aa)    
Predicted Functional Partners:
RB2654_19533
Uncharacterized protein (627 aa)
   
 
  0.986
RB2654_10094
Prephenate dehydratase (279 aa)
   
 
  0.985
RB2654_17391
Sulfurtransferase (291 aa)
 
 
    0.949
RB2654_05977
Aspartate aminotransferase (400 aa)
   
  0.887
RB2654_18683
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1138 aa)
   
 
  0.876
hisC
Imidazole acetol-phosphate transaminase (367 aa)
     
 
  0.856
RB2654_16706
Aminotransferase class IV , putative D-alanine aminotransferase (286 aa)
     
 
  0.855
RB2654_18758
Chorismate mutase (109 aa)
       
  0.853
RB2654_08302
Prephenate dehydrogenase (308 aa)
       
  0.852
RB2654_08047
Histidinol-phosphate aminotransferase (369 aa)
     
 
  0.842
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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