STRINGSTRING
trmB protein (Maritimibacter alkaliphilus) - STRING interaction network
"trmB" - tRNA(m7G46)-methyltransferase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trmBtRNA(m7G46)-methyltransferase ; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (237 aa)    
Predicted Functional Partners:
prmC
Protein-glutamine N-methyltransferase PrmC ; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (279 aa)
 
 
   
  0.784
RB2654_18203
Hemolysin, putative (296 aa)
 
          0.746
RB2654_18198
Apolipoprotein N-acyltransferase ; Transfers the fatty acyl group on membrane lipoproteins (509 aa)
 
          0.684
rplJ
50S ribosomal protein L10 ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (162 aa)
   
 
  0.670
RB2654_18228
Uncharacterized protein (307 aa)
 
 
      0.649
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (280 aa)
   
   
  0.630
RB2654_12164
Ribosomal RNA small subunit methyltransferase B, putative (420 aa)
   
 
  0.620
RB2654_03914
Possible NOL1/NOP2/sun family protein (390 aa)
   
 
  0.620
RB2654_18181
Transporter (142 aa)
              0.618
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (526 aa)
   
   
  0.616
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (9%) [HD]