STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ14599.1COG0341 Preprotein translocase subunit SecF. (179 aa)    
Predicted Functional Partners:
EAQ14598.1
Rod shape-determining protein, MreC; COG1792 Cell shape-determining protein.
 
     0.870
EAQ14600.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
    0.851
mrdB
Rod shape-determining protein MreD; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
       0.849
EAQ14602.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
       0.849
EAQ13444.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.739
EAQ12323.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
  
     0.732
EAQ10422.1
Hypothetical protein.
  
     0.728
EAQ10785.1
Hypothetical protein.
  
     0.727
EAQ14597.1
Rod shape-determining protein MreB; COG1077 Actin-like ATPase involved in cell morphogenesis.
       0.723
EAQ13726.1
COG1426 Uncharacterized protein conserved in bacteria.
  
    0.709
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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