STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (227 aa)    
Predicted Functional Partners:
EAQ10609.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 0.999
EAQ14721.1
ABC lipoprotein efflux transporter, inner membrane subunit, LolE; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
 0.999
EAQ13207.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.989
EAQ11214.1
Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
 
0.792
EAQ13488.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.728
EAQ10608.1
COG0845 Membrane-fusion protein.
  
 0.728
EAQ14905.1
NolF secretion protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.728
EAQ13889.1
Putative nitrate ABC transporter, periplasmic nitrate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
      0.677
EAQ11213.1
Peptide/opine/nickel uptake family ABC transporter,permease/ATP-binding protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Belongs to the binding-protein-dependent transport system permease family.
   
 
0.661
EAQ14748.1
COG0492 Thioredoxin reductase.
 
  
 0.650
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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