STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ14796.1TRAP family transporter, periplasmic substrate binding subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (340 aa)    
Predicted Functional Partners:
EAQ13226.1
TRAP dicarboxylate transporter, DctM subunit, putative; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.780
EAQ13227.1
Hypothetical protein.
  
 
  0.778
EAQ12841.1
Hypothetical protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
     0.750
EAQ10819.1
TRAP-T family transporter, DctP (periplasmic binding) subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
     0.673
EAQ12842.1
Hypothetical protein.
  
 
  0.670
EAQ14797.1
TrapT family, dctM subunit, C4-dicarboxylate transport; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
 
  0.669
EAQ11924.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
 
  0.637
EAQ12358.1
COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
 
 0.610
EAQ13812.1
PAS sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
     
 0.582
EAQ11407.1
TRAP-T family transporter, DctP (periplasmic binding) subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
     0.579
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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