STRINGSTRING
RB2654_19588 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_19588" - Outer membrane efflux protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_19588Outer membrane efflux protein (486 aa)    
Predicted Functional Partners:
RB2654_20013
Uncharacterized protein (1042 aa)
   
  0.943
RB2654_17436
Transporter, AcrB/AcrD/AcrF family protein (1118 aa)
   
  0.943
RB2654_02199
Transporter, AcrB/AcrD/AcrF family protein (1272 aa)
   
  0.943
RB2654_20018
NolF secretion protein (405 aa)
   
  0.885
RB2654_19583
Protein-L-isoaspartate carboxylmethyltransferase (217 aa)
 
     
  0.872
RB2654_02204
Efflux transporter, RND family, MFP subunit (367 aa)
 
  0.858
RB2654_07895
Uncharacterized protein (402 aa)
   
  0.828
RB2654_09064
Uncharacterized protein (378 aa)
   
 
  0.766
RB2654_07900
Uncharacterized protein (790 aa)
   
 
  0.766
RB2654_18011
HlyD family secretion protein (435 aa)
 
 
  0.721
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (13%) [HD]