STRINGSTRING
RB2654_20053 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20053" - Possible LuxR family protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20053Possible LuxR family protein (203 aa)    
Predicted Functional Partners:
RB2654_20048
Uncharacterized protein (195 aa)
 
     
  0.918
RB2654_12144
Uncharacterized protein (172 aa)
   
          0.594
RB2654_05210
Uncharacterized protein (88 aa)
   
          0.572
RB2654_10578
Uncharacterized protein (85 aa)
   
          0.564
RB2654_10418
Uncharacterized protein (265 aa)
   
          0.560
RB2654_04466
Type I secretion target repeat protein (229 aa)
   
          0.557
RB2654_07681
Uncharacterized protein (291 aa)
   
          0.540
RB2654_12309
Uncharacterized protein (197 aa)
   
          0.529
RB2654_08587
Lipoprotein, putative (314 aa)
   
          0.527
RB2654_02209
Uncharacterized protein (212 aa)
   
          0.518
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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