STRINGSTRING
RB2654_20368 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20368" - Transcriptional regulatory protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20368Transcriptional regulatory protein (156 aa)    
Predicted Functional Partners:
RB2654_20383
B-carotene ketolase (526 aa)
              0.712
RB2654_20378
Uncharacterized protein (78 aa)
              0.712
RB2654_20373
Uncharacterized protein (141 aa)
              0.712
RB2654_06609
Uncharacterized protein (206 aa)
 
   
  0.600
RB2654_20393
Uncharacterized protein (162 aa)
              0.519
RB2654_20388
Uncharacterized protein (203 aa)
              0.519
RB2654_19708
Alcohol dehydrogenase, zinc-containing (321 aa)
 
          0.515
RB2654_08472
Oxidoreductase, zinc-binding dehydrogenase family protein (286 aa)
 
          0.509
RB2654_11869
Putative zinc-binding oxidoreductase (308 aa)
 
          0.504
RB2654_23618
Uncharacterized protein (304 aa)
   
        0.439
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (9%) [HD]