STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ15043.1Pyridoxamine 5'-phosphate oxidase family protein; COG0748 Putative heme iron utilization protein. (165 aa)    
Predicted Functional Partners:
EAQ15042.1
Hypothetical protein.
       0.773
EAQ15041.1
Hypothetical protein.
       0.762
EAQ11627.1
ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
   
    0.713
EAQ14152.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
  
 0.557
EAQ14144.1
Heme acquisition protein hasR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.546
EAQ13296.1
Ferrichrome transport ATP-binding protein fhuC; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
  
  
 0.519
EAQ15044.1
Hypothetical protein.
       0.508
EAQ14150.1
Indolepyruvate ferredoxin oxidoreductase; COG0848 Biopolymer transport protein.
 
  
 0.497
EAQ12670.1
Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3.
     
 0.481
EAQ10501.1
Hypothetical protein.
  
     0.441
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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