STRINGSTRING
RB2654_20743 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20743" - Hemolysin C in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20743Hemolysin C (147 aa)    
Predicted Functional Partners:
RB2654_20748
Uncharacterized protein (314 aa)
              0.860
RB2654_08762
Hemolysin-type calcium-binding toxin (463 aa)
 
   
  0.667
RB2654_14100
Possible Zn-dependent metalloprotease (622 aa)
 
   
  0.661
RB2654_08752
Protease PrtA (415 aa)
 
   
  0.636
RB2654_06719
Uncharacterized protein (1426 aa)
 
   
  0.523
RB2654_20478
Uncharacterized protein (991 aa)
 
          0.452
RB2654_18703
Type I secretion target repeat protein (710 aa)
   
          0.423
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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