STRINGSTRING
deoB protein (Maritimibacter alkaliphilus) - STRING interaction network
"deoB" - Phosphodeoxyribomutase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoBPhosphodeoxyribomutase ; Phosphotransfer between the C1 and C5 carbon atoms of pentose (403 aa)    
Predicted Functional Partners:
RB2654_10383
Deoxyribose-phosphate aldolase (350 aa)
 
 
  0.994
RB2654_11999
Thymidine phosphorylase ; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis (434 aa)
 
 
  0.987
RB2654_09684
Inosine-guanosine phosphorylase ; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate (267 aa)
       
  0.947
RB2654_20823
Cytidine deaminase (138 aa)
 
     
  0.944
upp
UPRTase ; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (210 aa)
   
   
  0.887
RB2654_20833
Adenosine deaminase (335 aa)
              0.880
RB2654_04284
Ribose 5-phosphate isomerase B (146 aa)
         
  0.860
prs
Phosphoribosyl pyrophosphate synthase ; Involved in the biosynthesis of ribose 1,5-bisphosphate. Catalyzes the transfer of pyrophosphoryl group from ATP to ribose- 5-phosphate to yield phosphoribosyl diphosphate (PRPP) and AMP (337 aa)
         
  0.853
RB2654_13584
Putative RbsK, Carbohydrate kinase, ribokinase family protein (288 aa)
     
 
  0.843
rpiA
Phosphoriboisomerase A ; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (260 aa)
       
  0.842
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (7%) [HD]