STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ15092.1Protocatechuate 4,5-dioxygenase, beta chain. (283 aa)    
Predicted Functional Partners:
EAQ15093.1
Protocatechuate 4,5-dioxygenase, alpha chain.
 
 0.999
EAQ15091.1
COG0673 Predicted dehydrogenases and related proteins.
 
  
 0.961
EAQ10395.1
Possible protocatechuate 4,5-dioxygenase small subunit; Similar to GenBank Accession Number AB035121; COG0807 GTP cyclohydrolase II.
  
 0.939
EAQ15094.1
Hypothetical protein; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
 
     0.916
EAQ10393.1
2-pyrone-4,6-dicarboxylic acid hydrolase; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
 0.905
EAQ15095.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.886
EAQ15097.1
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
 
   
 0.862
EAQ15035.1
COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
 0.829
EAQ15098.1
FldA protein; COG2828 Uncharacterized protein conserved in bacteria.
 
  
 0.730
EAQ14773.1
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
  
 0.650
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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