STRINGSTRING
RB2654_20973 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20973" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20973Uncharacterized protein (245 aa)    
Predicted Functional Partners:
RB2654_20978
Uncharacterized protein (230 aa)
 
   
    0.993
RB2654_20983
FldA protein (126 aa)
 
   
    0.962
RB2654_20963
Uncharacterized protein (313 aa)
 
          0.901
RB2654_20968
Transcriptional regulator, LysR family protein (412 aa)
 
          0.884
RB2654_20238
Putative glycosyltransferase (406 aa)
   
  0.721
RB2654_12219
Putative lipopolysaccharide biosynthesis protein (359 aa)
   
  0.721
RB2654_12194
Hypothetical mannosyltransferase (377 aa)
   
  0.721
RB2654_10743
Glycosyltransferase (334 aa)
   
  0.721
RB2654_02879
Glycosyl transferase, group 1 family protein (403 aa)
   
  0.721
RB2654_20948
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase (314 aa)
              0.496
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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