STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ15096.1COG2120 Uncharacterized proteins, LmbE homologs. (245 aa)    
Predicted Functional Partners:
EAQ15097.1
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
  
 0.997
EAQ15098.1
FldA protein; COG2828 Uncharacterized protein conserved in bacteria.
 
  
 0.984
EAQ15095.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.858
EAQ15094.1
Hypothetical protein; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
 
     0.852
EAQ12434.1
COG0662 Mannose-6-phosphate isomerase.
     
 0.794
cysS
COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.747
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
    
 0.559
EAQ12894.1
Putative transcriptional regulator, ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
    
  0.552
EAQ14033.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.545
EAQ14031.1
Hypothetical protein; COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
  
     0.524
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.