STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ10720.1COG1573 Uracil-DNA glycosylase. (426 aa)    
Predicted Functional Partners:
EAQ10721.1
COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif.
     0.972
EAQ14478.1
Hypothetical protein; COG1573 Uracil-DNA glycosylase.
  
  
 
0.912
dnaE2
DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
      0.641
EAQ10722.1
AMP-binding protein; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
       0.561
EAQ11600.1
Single-strand DNA binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
   0.523
EAQ11116.1
Probable single-strand binding protein (Ssb); Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
   0.523
EAQ11325.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
    0.521
EAQ14625.1
Hypothetical protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
  
    0.466
EAQ14727.1
COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase).
 
     0.462
EAQ10974.1
Putative DNA topoisomerase I protein; COG3569 Topoisomerase IB.
  
     0.437
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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