STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ10746.1Efflux ABC transporter, permease protein; COG0842 ABC-type multidrug transport system, permease component. (269 aa)    
Predicted Functional Partners:
EAQ10745.1
Efflux ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.977
EAQ10743.1
Hypothetical protein.
 
  
 0.931
EAQ10744.1
Hypothetical protein.
 
     0.923
EAQ10742.1
Hypothetical protein.
 
   
 0.908
EAQ13247.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.883
EAQ13242.1
Hypothetical protein.
 
  
 0.839
EAQ10749.1
Quinoprotein ethanol dehydrogenase; COG4993 Glucose dehydrogenase.
 
     0.808
EAQ10741.1
Cytochrome c550, putative; COG2010 Cytochrome c, mono- and diheme variants.
 
     0.807
EAQ10740.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
     0.790
EAQ13241.1
Hypothetical protein.
 
   
 0.785
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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