STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11176.1Regulatory protein GntR, HTH:GntR, C-terminal; COG1802 Transcriptional regulators. (233 aa)    
Predicted Functional Partners:
EAQ11177.1
C4-dicarboxylate-binding periplasmic protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.735
EAQ12828.1
COG1802 Transcriptional regulators.
  
     0.715
EAQ12873.1
Hypothetical protein; COG1802 Transcriptional regulators.
  
     0.679
EAQ12880.1
Transcriptional regulatory protein; COG1802 Transcriptional regulators.
  
     0.617
EAQ12185.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.593
EAQ11386.1
Transcriptional regulatory protein; COG1802 Transcriptional regulators.
  
     0.574
EAQ14030.1
Hypothetical protein; COG1802 Transcriptional regulators.
  
     0.536
EAQ15031.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.523
EAQ11175.1
Fructose-1,6-bisphosphatase, class II; COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins.
       0.486
EAQ11173.1
COG0645 Predicted kinase.
       0.480
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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