STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11191.1Type II/IV secretion system protein, TadA subfamily protein; COG4962 Flp pilus assembly protein, ATPase CpaF. (494 aa)    
Predicted Functional Partners:
EAQ11190.1
COG2064 Flp pilus assembly protein TadC.
 
  
 0.972
EAQ11189.1
Type II/IV secretion system protein, TadC subfamily protein; COG2064 Flp pilus assembly protein TadC.
 
  
 0.969
EAQ11192.1
Putative Flp pilus assembly protein ATPase CpaE; COG0006 Xaa-Pro aminopeptidase.
 
  
 0.959
EAQ11194.1
Outer membrane general secretion pathway protein, Secretin; COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
  
 0.922
EAQ13360.1
COG4965 Flp pilus assembly protein TadB.
 
  
 0.884
EAQ11195.1
CpaB family protein; COG3745 Flp pilus assembly protein CpaB.
 
  
 0.881
EAQ13359.1
COG2064 Flp pilus assembly protein TadC.
 
  
 0.877
EAQ13366.1
COG3745 Flp pilus assembly protein CpaB.
 
  
 0.854
EAQ13362.1
ATPase, putative; COG4963 Flp pilus assembly protein, ATPase CpaE.
 
  
 0.848
EAQ11184.1
COG0606 Predicted ATPase with chaperone activity.
 
     0.708
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.