STRINGSTRING
RB2654_21468 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_21468" - Peptide/opine/nickel uptake family ABC transporter, permease protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_21468Peptide/opine/nickel uptake family ABC transporter, permease protein (315 aa)    
Predicted Functional Partners:
RB2654_21473
Peptide/opine/nickel uptake family ABC transporter,permease/ATP-binding protein (621 aa)
  0.995
RB2654_21478
Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein (317 aa)
  0.994
RB2654_21463
Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein (528 aa)
 
  0.982
RB2654_06934
Oligopeptide ABC transporter permease protein (278 aa)
  0.972
RB2654_17121
Probable dipeptide transport system permease protein (303 aa)
  0.971
RB2654_11713
ABC superfamily (Membrane), oligopeptide transport protein (310 aa)
  0.968
RB2654_17786
Peptide/opine/nickel uptake family ABC transporter, permease protein (273 aa)
  0.965
RB2654_17116
Probable ATP-binding component of ABC transporter (324 aa)
  0.965
RB2654_17111
Probable ATP-binding component of ABC dipeptide transporter (316 aa)
  0.960
RB2654_17816
Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein (502 aa)
 
  0.938
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (5%) [HD]