STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ10805.1Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic-binding protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component. (391 aa)    
Predicted Functional Partners:
EAQ10804.1
Hypothetical protein; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
  
  0.941
EAQ10810.1
pimeloyl-CoA dehydrogenase (large subunit); COG1960 Acyl-CoA dehydrogenases.
 
     0.666
EAQ10807.1
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.661
EAQ10808.1
COG0183 Acetyl-CoA acetyltransferase.
 
     0.661
EAQ12360.1
Bacterial extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
   
 
 0.641
EAQ13812.1
PAS sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
    
  0.611
EAQ13878.1
TRAP transporter, DctQ subunit; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
 
  0.600
EAQ10806.1
3-oxoacyl-[acyl-carrier protein] reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.596
EAQ10809.1
COG1960 Acyl-CoA dehydrogenases.
       0.596
EAQ13171.1
TRAP transporter, 4TM/12TM fusion protein; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
 
  0.594
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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