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RB2654_21658 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_21658" - LysR family transcriptional regulatory protein in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_21658LysR family transcriptional regulatory protein (325 aa)    
Predicted Functional Partners:
RB2654_07099
Putative transcription regulator protein (334 aa)
   
        0.770
RB2654_02504
Transcriptional regulator, LysR family protein (301 aa)
   
          0.727
RB2654_13945
Transcriptional regulator (313 aa)
   
          0.699
RB2654_23278
Probable transcriptional regulator (301 aa)
   
          0.686
RB2654_23248
Putative transcription regulator protein (408 aa)
   
          0.673
RB2654_13730
Probable transcriptional regulator (293 aa)
   
        0.554
RB2654_09819
Transcriptional regulator, LysR family protein (295 aa)
   
        0.490
RB2654_09319
Transcriptional regulator, LysR family protein (331 aa)
   
          0.484
RB2654_18803
Transcriptional regulator, LysR family protein (288 aa)
   
          0.464
RB2654_21653
L-carnitine dehydratase/bile acid-inducible protein F (365 aa)
              0.447
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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