STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11633.1Membrane protein, putative. (220 aa)    
Predicted Functional Partners:
EAQ11634.1
Hypothetical protein.
       0.785
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
  0.763
EAQ11635.1
Hypothetical protein.
 
     0.734
EAQ11632.1
COG1230 Co/Zn/Cd efflux system component.
       0.692
EAQ11638.1
COG0642 Signal transduction histidine kinase.
 
     0.676
EAQ11058.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.645
EAQ11636.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
 
     0.538
EAQ11663.1
COG5126 Ca2+-binding protein (EF-Hand superfamily).
 
     0.506
EAQ11639.1
COG3462 Predicted membrane protein.
 
     0.505
EAQ14983.1
Selenide, water dikinase, putative; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
 
  0.495
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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