STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11641.1Cytochrome c biogenesis protein CycX; COG0526 Thiol-disulfide isomerase and thioredoxins. (188 aa)    
Predicted Functional Partners:
EAQ11640.1
Hypothetical protein; COG1138 Cytochrome c biogenesis factor.
 
  
 0.986
EAQ11644.1
Putative suppressor for copper-sensitivity B precursor; COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis.
 
 
 0.978
EAQ11642.1
Hypothetical protein; Possible subunit of a heme lyase.
 
  
 0.974
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.973
EAQ11643.1
Cytochrome c-type biogenesis transmembrane protein; COG4235 Cytochrome c biogenesis factor.
 
  
 0.971
EAQ14217.1
Thiol-specific antioxidant protein; COG0450 Peroxiredoxin.
  
 0.966
EAQ13561.1
Cytochrome c-type biogenesis protein CcmF; COG1138 Cytochrome c biogenesis factor.
 
  
 0.942
ccmC
ABC heme exporter, inner membrane subunit CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
  
 0.927
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
  
 0.903
EAQ13562.1
Cytochrome c maturation protein, CcmH; Possible subunit of a heme lyase.
 
  
 0.888
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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