STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11663.1COG5126 Ca2+-binding protein (EF-Hand superfamily). (162 aa)    
Predicted Functional Partners:
EAQ14726.1
Hypothetical protein.
    
   0.913
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 
 0.912
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.877
EAQ11638.1
COG0642 Signal transduction histidine kinase.
 
 
 
 0.799
EAQ13670.1
COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
   
 0.795
EAQ11639.1
COG3462 Predicted membrane protein.
 
     0.768
EAQ11643.1
Cytochrome c-type biogenesis transmembrane protein; COG4235 Cytochrome c biogenesis factor.
  
     0.749
EAQ11648.1
Putative cytochrome C-like protein; COG3909 Cytochrome c556.
  
     0.746
EAQ11635.1
Hypothetical protein.
  
     0.745
EAQ11636.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
 
     0.739
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.