STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11712.1Type IV secretion system coupling protein; COG3505 Type IV secretory pathway, VirD4 components. (666 aa)    
Predicted Functional Partners:
EAQ11713.1
T-DNA border endonuclease; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
 
   
 0.953
EAQ11714.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
     0.949
EAQ11703.1
Conjugal transfer protein; COG2948 Type IV secretory pathway, VirB10 components.
 
 
 0.848
EAQ11155.1
Conjugal transfer protein; COG1196 Chromosome segregation ATPases.
 
 
 0.847
EAQ11823.1
Type IV secretion system protein B10, putative; COG2948 Type IV secretory pathway, VirB10 components.
 
 
 0.813
EAQ11697.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
  
 0.792
EAQ11161.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
  
 0.791
EAQ11702.1
Conjugal transfer protein, trbG; COG3504 Type IV secretory pathway, VirB9 components.
   
 0.789
EAQ11815.1
Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components.
  
 0.787
EAQ11696.1
COG3702 Type IV secretory pathway, VirB3 components.
 
   
 0.787
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.