STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11741.1Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit. (154 aa)    
Predicted Functional Partners:
EAQ11742.1
Hypothetical protein.
 
    0.947
EAQ12670.1
Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3.
    
  0.832
EAQ10526.1
Hypothetical protein.
 
    0.777
EAQ11864.1
Hypothetical protein.
 
    0.777
EAQ10880.1
Hypothetical protein; COG0466 ATP-dependent Lon protease, bacterial type.
 
    0.777
EAQ13748.1
COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain.
 
    0.776
EAQ14107.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
     
 0.495
EAQ15065.1
COG0281 Malic enzyme.
     
 0.495
EAQ11740.1
Hypothetical protein.
       0.476
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.439
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.