STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11161.1Type IV secretion system protein B4, putative; COG3451 Type IV secretory pathway, VirB4 components. (794 aa)    
Predicted Functional Partners:
EAQ11157.1
COG3736 Type IV secretory pathway, component VirB8.
 
 
 0.987
EAQ11155.1
Conjugal transfer protein; COG1196 Chromosome segregation ATPases.
 
 
 0.972
EAQ11156.1
Type IV secretion system protein B9, putative; COG3504 Type IV secretory pathway, VirB9 components.
 
 
 0.972
EAQ11696.1
COG3702 Type IV secretory pathway, VirB3 components.
 
 
 0.961
EAQ11814.1
Hypothetical protein.
 
 
 0.956
EAQ11701.1
COG3736 Type IV secretory pathway, component VirB8.
 
 
 0.954
EAQ11702.1
Conjugal transfer protein, trbG; COG3504 Type IV secretory pathway, VirB9 components.
 
 0.949
EAQ11158.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
     0.949
EAQ11821.1
COG3736 Type IV secretory pathway, component VirB8.
 
 
 0.946
EAQ11703.1
Conjugal transfer protein; COG2948 Type IV secretory pathway, VirB10 components.
 
 
 0.946
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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