STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11330.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (408 aa)    
Predicted Functional Partners:
EAQ11331.1
Hypothetical protein; COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
     0.697
EAQ12883.1
COG1879 ABC-type sugar transport system, periplasmic component.
  
     0.655
EAQ11333.1
Putative membrane protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.622
EAQ11335.1
Protocatechuate 4,5-dioxygenase.
 
     0.580
EAQ10995.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.537
EAQ11336.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.509
EAQ15097.1
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
  
     0.480
EAQ15094.1
Hypothetical protein; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
  
     0.472
EAQ11334.1
Putative extracellular solute-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.447
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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