STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11345.1Bile acid transporter family protein; COG0385 Predicted Na+-dependent transporter. (298 aa)    
Predicted Functional Partners:
EAQ11346.1
Hypothetical protein; COG0451 Nucleoside-diphosphate-sugar epimerases.
 
 
   0.958
EAQ11344.1
Monooxygenase domain protein; COG2072 Predicted flavoprotein involved in K+ transport.
     0.954
EAQ11347.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.951
EAQ11343.1
Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
 
     0.871
EAQ10499.1
Membrane protein, putative; COG3714 Predicted membrane protein.
  
     0.433
EAQ11341.1
Putative ABC transporter, inner membrane subunit; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
  
 0.422
EAQ10456.1
Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
  0.409
EAQ13114.1
Thiol:disulfide interchange protein, putative; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
  0.409
EAQ12518.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
  0.409
EAQ11641.1
Cytochrome c biogenesis protein CycX; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
  0.409
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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