STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11405.1TRAP-T family transporter, DctM (12 TMs) subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. (434 aa)    
Predicted Functional Partners:
EAQ11406.1
TRAP-T family transporter, DctQ (4 TMs) subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
  0.907
EAQ11407.1
TRAP-T family transporter, DctP (periplasmic binding) subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.832
EAQ12360.1
Bacterial extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.827
EAQ11334.1
Putative extracellular solute-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.824
EAQ12788.1
Probable extracellular solute-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.815
EAQ14805.1
Putative ABC transporter periplasmic substrate-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.814
EAQ11777.1
TRAP-T family transporter, periplasmic binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 
  0.809
EAQ14032.1
TRAP family transporter, periplasmic substrate binding subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.809
EAQ10814.1
Putative membrane protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
  0.790
EAQ10819.1
TRAP-T family transporter, DctP (periplasmic binding) subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.790
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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