Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMJ82215.1 | AMJ82216.1 | AV941_07030 | AV941_07035 | Calcium:proton antiporter; YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AMJ82215.1 | AMJ82217.1 | AV941_07030 | AV941_07040 | Calcium:proton antiporter; YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AMJ82216.1 | AMJ82215.1 | AV941_07035 | AV941_07030 | Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Calcium:proton antiporter; YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AMJ82216.1 | AMJ82217.1 | AV941_07035 | AV941_07040 | Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
AMJ82217.1 | AMJ82215.1 | AV941_07040 | AV941_07030 | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Calcium:proton antiporter; YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AMJ82217.1 | AMJ82216.1 | AV941_07040 | AV941_07035 | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
AMJ82217.1 | AMJ84159.1 | AV941_07040 | AV941_17840 | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
AMJ82217.1 | guaA | AV941_07040 | AV941_13560 | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.461 |
AMJ84159.1 | AMJ82217.1 | AV941_17840 | AV941_07040 | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.452 |
guaA | AMJ82217.1 | AV941_13560 | AV941_07040 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |