STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ30934.1COG2166 SufE protein probably involved in Fe-S center assembly. (129 aa)    
Predicted Functional Partners:
EAQ33250.1
Selenocysteine lyase/Cysteine desulfurase; COG0520 Selenocysteine lyase.
 
 0.948
EAQ33247.1
Cysteine desulfurase activator SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
   0.677
EAQ30935.1
COG2086 Electron transfer flavoprotein, beta subunit.
       0.639
EAQ30936.1
COG2025 Electron transfer flavoprotein, alpha subunit.
       0.639
EAQ33248.1
Cysteine desulfurase activator ATPase; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
   0.628
EAQ33249.1
Cysteine desulfurase activator SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
   0.615
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.