Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32393.1COG0539 Ribosomal protein S1. (190 aa)    
Predicted Functional Partners:
EAQ30950.1
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
     0.986
EAQ31002.1
COG0522 Ribosomal protein S4 and related proteins.
   
 0.985
EAQ31001.1
COG0100 Ribosomal protein S11.
   
 0.984
EAQ31376.1
COG0049 Ribosomal protein S7.
   
 0.983
rpsB
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
 
 
 0.983
EAQ30992.1
COG0096 Ribosomal protein S8.
   
 0.982
EAQ31377.1
COG0048 Ribosomal protein S12.
   
 0.978
EAQ30791.1
COG0088 Ribosomal protein L4.
  
 0.978
EAQ30789.1
COG0051 Ribosomal protein S10.
  
 
 0.977
EAQ31381.1
COG0244 Ribosomal protein L10.
   
 
 0.976
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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