Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32439.1Zn-ribbon protein; COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains. (69 aa)    
Predicted Functional Partners:
EAQ32219.1
Hypothetical protein.
 
     0.751
EAQ31344.1
Type II secretory pathway component; COG0013 Alanyl-tRNA synthetase.
  
     0.740
EAQ31444.1
Hypothetical protein.
  
     0.739
EAQ31358.1
Type II secretory pathway component.
  
     0.734
EAQ31346.1
Pilin protein.
  
     0.732
EAQ30808.1
Na+-type flagellar protein, contains TPR repeats; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.726
EAQ32438.1
Predicted permease, DMT superfamily protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.722
EAQ32684.1
Uncharacterized conserved membrane protein; COG0495 Leucyl-tRNA synthetase.
  
     0.719
EAQ32721.1
Uncharacterized conserved secreted protein.
  
     0.716
EAQ32719.1
Hypothetical protein.
  
    0.715
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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