Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ31453.1 | EAQ31850.1 | OS145_10085 | OS145_11107 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | COG0196 FAD synthase. | 0.909 |
EAQ31453.1 | EAQ32253.1 | OS145_10085 | OS145_08477 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | 0.695 |
EAQ31453.1 | EAQ32440.1 | OS145_10085 | OS145_00520 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | COG0307 Riboflavin synthase alpha chain. | 0.999 |
EAQ31453.1 | EAQ32671.1 | OS145_10085 | OS145_09373 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | COG1011 Predicted hydrolase (HAD superfamily). | 0.408 |
EAQ31453.1 | hisI | OS145_10085 | OS145_10215 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | COG0139 Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family. | 0.859 |
EAQ31453.1 | ribD | OS145_10085 | OS145_10080 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | Riboflavin-specific deaminase/reductase; COG0117 Pyrimidine deaminase. | 0.999 |
EAQ31453.1 | ribH | OS145_10085 | OS145_04433 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | Riboflavin synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.999 |
EAQ31453.1 | rpmE | OS145_10085 | OS145_09113 | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | Ribosomal protein L31; Binds the 23S rRNA. | 0.549 |
EAQ31850.1 | EAQ31453.1 | OS145_11107 | OS145_10085 | COG0196 FAD synthase. | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | 0.909 |
EAQ31850.1 | EAQ32253.1 | OS145_11107 | OS145_08477 | COG0196 FAD synthase. | COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | 0.823 |
EAQ31850.1 | EAQ32440.1 | OS145_11107 | OS145_00520 | COG0196 FAD synthase. | COG0307 Riboflavin synthase alpha chain. | 0.934 |
EAQ31850.1 | EAQ32671.1 | OS145_11107 | OS145_09373 | COG0196 FAD synthase. | COG1011 Predicted hydrolase (HAD superfamily). | 0.825 |
EAQ31850.1 | ribD | OS145_11107 | OS145_10080 | COG0196 FAD synthase. | Riboflavin-specific deaminase/reductase; COG0117 Pyrimidine deaminase. | 0.717 |
EAQ31850.1 | ribH | OS145_11107 | OS145_04433 | COG0196 FAD synthase. | Riboflavin synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.862 |
EAQ32253.1 | EAQ31453.1 | OS145_08477 | OS145_10085 | COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | 0.695 |
EAQ32253.1 | EAQ31850.1 | OS145_08477 | OS145_11107 | COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | COG0196 FAD synthase. | 0.823 |
EAQ32253.1 | EAQ32440.1 | OS145_08477 | OS145_00520 | COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | COG0307 Riboflavin synthase alpha chain. | 0.805 |
EAQ32253.1 | EAQ32671.1 | OS145_08477 | OS145_09373 | COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. | COG1011 Predicted hydrolase (HAD superfamily). | 0.807 |
EAQ32440.1 | EAQ31453.1 | OS145_00520 | OS145_10085 | COG0307 Riboflavin synthase alpha chain. | COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase. | 0.999 |
EAQ32440.1 | EAQ31850.1 | OS145_00520 | OS145_11107 | COG0307 Riboflavin synthase alpha chain. | COG0196 FAD synthase. | 0.934 |
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