STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32445.1Signaling protein with membrane-bound sensor domain and GGDEF domain; COG2199 FOG: GGDEF domain. (394 aa)    
Predicted Functional Partners:
EAQ32660.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
  0.941
EAQ31934.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
  0.856
EAQ32806.1
Putative two-component response regulator; COG2200 FOG: EAL domain.
  0.835
EAQ32741.1
Signaling protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
  0.828
EAQ33074.1
Membrane-anchored signaling protein (PAS,GGDEF,EAL domains); COG2199 FOG: GGDEF domain.
  
  0.822
EAQ30932.1
PAS domain containing signalling protein.
 
      0.821
EAQ32793.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
 
  0.818
EAQ32664.1
Signaling protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
  0.818
EAQ31848.1
Sensory box/GGDEF domain/EAL domain protein; COG2202 FOG: PAS/PAC domain.
  
  0.807
EAQ31681.1
Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase.
 0.801
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.