Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32503.1COG3235 Predicted membrane protein. (211 aa)    
Predicted Functional Partners:
EAQ32502.1
COG0708 Exonuclease III.
       0.764
EAQ31818.1
Uncharacterized conserved secreted protein.
  
     0.611
EAQ32000.1
Hypothetical protein.
  
     0.569
EAQ31819.1
COG3018 Uncharacterized protein conserved in bacteria.
  
     0.561
EAQ32501.1
Uncharacterized conserved membrane protein.
 
     0.536
EAQ31869.1
Uncharacterized conserved secreted protein.
  
     0.507
EAQ31271.1
Uncharacterized conserved secreted protein.
  
     0.502
EAQ30932.1
PAS domain containing signalling protein.
  
     0.494
EAQ32500.1
Alpha/beta superfamily hydrolase.
       0.466
ccoS
COG3197 Uncharacterized protein, possibly involved in nitrogen fixation.
  
     0.440
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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