STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
furTranscriptional regulator of Fe2+ uptake; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family. (147 aa)    
Predicted Functional Partners:
EAQ30917.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.947
EAQ32688.1
Uncharacterized conserved membrane protein.
       0.834
EAQ32686.1
Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
  
  
 0.794
EAQ31003.1
COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit.
   
 
 0.725
EAQ32684.1
Uncharacterized conserved membrane protein; COG0495 Leucyl-tRNA synthetase.
       0.685
EAQ32685.1
Hypothetical protein.
       0.647
EAQ32256.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 
 0.619
EAQ31511.1
Peroxiredoxin, AhpC/Tsa family protein; COG0450 Peroxiredoxin.
  
  
 0.576
EAQ30902.1
Peroxiredoxin, AhpC/Tsa family protein; COG0450 Peroxiredoxin.
  
  
 0.576
ychF
Predicted GTPase, probable translation factor; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
      
 0.563
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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