STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32699.1Probable lysophospholipase, alpha/beta hydrolase superfamily protein; COG2267 Lysophospholipase. (307 aa)    
Predicted Functional Partners:
EAQ32545.1
COG1145 Ferredoxin.
   
   0.912
EAQ32638.1
COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
   0.886
EAQ31729.1
Hypothetical protein.
  
     0.645
EAQ33352.1
Fatty acid oxidation complex alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
    
 0.643
EAQ31192.1
Fatty oxidation complex, alpha subunit; COG1024 Enoyl-CoA hydratase/carnithine racemase.
    
 0.643
EAQ31987.1
Putative protein phosphatase with Diacylglycerol kinase domain; COG0671 Membrane-associated phospholipid phosphatase.
  
 
 0.582
EAQ32944.1
COG1276 Putative copper export protein.
  
     0.564
EAQ31636.1
COG2857 Cytochrome c1.
   
    0.558
EAQ32917.1
Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein.
  
 
   0.538
EAQ33338.1
DNA polymerase I; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
 
 
   0.517
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.