STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32739.1COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (441 aa)    
Predicted Functional Partners:
EAQ32740.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
    
0.864
EAQ32427.1
Hypothetical protein.
  
  
 0.791
EAQ31284.1
COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
   
 0.676
EAQ32738.1
Uncharacterized conserved membrane protein.
 
     0.644
EAQ32001.1
Hypothetical protein.
 
     0.590
ybeY
Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.443
glpE
Rhodanese-related sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
  
 
   0.422
msbA
ABC-type multidrug transport system, ATPase and permease component; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
 
 0.407
EAQ32659.1
COG1132 ABC-type multidrug transport system, ATPase and permease components.
    
 
 0.407
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.