STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32739.1COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (441 aa)    
Predicted Functional Partners:
EAQ32740.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
    
0.867
EAQ32427.1
Hypothetical protein.
  
  
 0.826
EAQ31284.1
COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
   
 0.671
EAQ32738.1
Uncharacterized conserved membrane protein.
 
     0.639
EAQ32001.1
Hypothetical protein.
 
     0.591
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.