STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32749.1Thermostable hemolysin related protein. (214 aa)    
Predicted Functional Partners:
EAQ32746.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.967
EAQ32748.1
COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
 
   
 0.965
EAQ32747.1
Heme oxygenase related enzyme.
 
   
 0.962
EAQ32745.1
TPR repeats containing protein; COG0457 FOG: TPR repeat.
 
     0.958
EAQ32743.1
COG0642 Signal transduction histidine kinase.
 
     0.852
EAQ32744.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.727
EAQ32742.1
Putative diguanylate cyclase (GGDEF); COG2199 FOG: GGDEF domain.
       0.549
EAQ32750.1
Hypothetical protein.
       0.492
EAQ32944.1
COG1276 Putative copper export protein.
  
     0.433
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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