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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32763.1COG1131 ABC-type multidrug transport system, ATPase component. (233 aa)    
Predicted Functional Partners:
EAQ32762.1
COG0842 ABC-type multidrug transport system, permease component.
 
 
 0.959
atpD
COG0055 F0F1-type ATP synthase, beta subunit.
    
 
 0.868
atpA
F0F1-type ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.861
atpG
F0F1-type ATP synthase, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.839
EAQ32761.1
Secreted metal-dependent hydrolase, amidohydrolase family protein; COG1228 Imidazolonepropionase and related amidohydrolases.
       0.809
atpC
F0F1-type ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.798
EAQ32378.1
COG0842 ABC-type multidrug transport system, permease component.
 
 0.760
msbA
ABC-type multidrug transport system, ATPase and permease component; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 0.721
EAQ32765.1
Response regulator, LuxR family protein (CheY, HTH domains); COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
   
 0.690
EAQ32764.1
Signaling protein with membrane-bound sensor domain and an ATPase domain; COG4585 Signal transduction histidine kinase.
 
  
 0.682
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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