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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32779.1COG1566 Multidrug resistance efflux pump. (367 aa)    
Predicted Functional Partners:
EAQ32778.1
Efflux pump protein FarB; COG0477 Permeases of the major facilitator superfamily.
 
 
 0.988
EAQ32780.1
COG1846 Transcriptional regulators.
 
  
 0.931
EAQ33292.1
COG1538 Outer membrane protein.
 
 0.926
EAQ30861.1
COG1538 Outer membrane protein.
  
 0.821
EAQ32841.1
COG1538 Outer membrane protein.
  
 0.730
EAQ32917.1
Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein.
  
 0.730
EAQ32961.1
Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein.
  
 0.730
EAQ32962.1
Outer membrane protein, probably efflux family protein; COG1538 Outer membrane protein.
  
 0.730
EAQ31367.1
Transcriptional regulator, MarR family protein; COG1846 Transcriptional regulators.
 
  
 0.669
EAQ32011.1
Probable acriflavine resistance protein A, RND family efflux system component; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.646
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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