Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ30810.1 | EAQ30963.1 | OS145_03542 | OS145_00145 | Biotin operon repressor/biotin--protein ligase fusion protein; COG1654 Biotin operon repressor. | COG0591 Na+/proline symporter. | 0.457 |
EAQ30810.1 | EAQ31681.1 | OS145_03542 | OS145_10590 | Biotin operon repressor/biotin--protein ligase fusion protein; COG1654 Biotin operon repressor. | Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase. | 0.483 |
EAQ30810.1 | EAQ32780.1 | OS145_03542 | OS145_01437 | Biotin operon repressor/biotin--protein ligase fusion protein; COG1654 Biotin operon repressor. | COG1846 Transcriptional regulators. | 0.469 |
EAQ30810.1 | EAQ33057.1 | OS145_03542 | OS145_04483 | Biotin operon repressor/biotin--protein ligase fusion protein; COG1654 Biotin operon repressor. | PAS domain-containing protein; COG0591 Na+/proline symporter. | 0.457 |
EAQ30851.1 | EAQ30963.1 | OS145_00010 | OS145_00145 | COG2198 FOG: HPt domain. | COG0591 Na+/proline symporter. | 0.999 |
EAQ30851.1 | EAQ31366.1 | OS145_00010 | OS145_05625 | COG2198 FOG: HPt domain. | Multidrug resistance efflux pump, HlyD family protein; COG1566 Multidrug resistance efflux pump. | 0.423 |
EAQ30851.1 | EAQ31681.1 | OS145_00010 | OS145_10590 | COG2198 FOG: HPt domain. | Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase. | 0.999 |
EAQ30851.1 | EAQ32505.1 | OS145_00010 | OS145_00845 | COG2198 FOG: HPt domain. | PTS system, glucose-specific IIA component; COG2190 Phosphotransferase system IIA components. | 0.416 |
EAQ30851.1 | EAQ32778.1 | OS145_00010 | OS145_01427 | COG2198 FOG: HPt domain. | Efflux pump protein FarB; COG0477 Permeases of the major facilitator superfamily. | 0.408 |
EAQ30851.1 | EAQ32779.1 | OS145_00010 | OS145_01432 | COG2198 FOG: HPt domain. | COG1566 Multidrug resistance efflux pump. | 0.423 |
EAQ30851.1 | EAQ32780.1 | OS145_00010 | OS145_01437 | COG2198 FOG: HPt domain. | COG1846 Transcriptional regulators. | 0.413 |
EAQ30851.1 | EAQ33057.1 | OS145_00010 | OS145_04483 | COG2198 FOG: HPt domain. | PAS domain-containing protein; COG0591 Na+/proline symporter. | 0.999 |
EAQ30963.1 | EAQ30810.1 | OS145_00145 | OS145_03542 | COG0591 Na+/proline symporter. | Biotin operon repressor/biotin--protein ligase fusion protein; COG1654 Biotin operon repressor. | 0.457 |
EAQ30963.1 | EAQ30851.1 | OS145_00145 | OS145_00010 | COG0591 Na+/proline symporter. | COG2198 FOG: HPt domain. | 0.999 |
EAQ30963.1 | EAQ31681.1 | OS145_00145 | OS145_10590 | COG0591 Na+/proline symporter. | Hybrid sensor histidine kinase (HisK, 2 CheY, Hpt domains); COG0642 Signal transduction histidine kinase. | 0.999 |
EAQ30963.1 | EAQ32505.1 | OS145_00145 | OS145_00845 | COG0591 Na+/proline symporter. | PTS system, glucose-specific IIA component; COG2190 Phosphotransferase system IIA components. | 0.438 |
EAQ30963.1 | EAQ32778.1 | OS145_00145 | OS145_01427 | COG0591 Na+/proline symporter. | Efflux pump protein FarB; COG0477 Permeases of the major facilitator superfamily. | 0.405 |
EAQ30963.1 | EAQ32780.1 | OS145_00145 | OS145_01437 | COG0591 Na+/proline symporter. | COG1846 Transcriptional regulators. | 0.412 |
EAQ30963.1 | EAQ32781.1 | OS145_00145 | OS145_01442 | COG0591 Na+/proline symporter. | COG0753 Catalase. | 0.405 |
EAQ30963.1 | EAQ33057.1 | OS145_00145 | OS145_04483 | COG0591 Na+/proline symporter. | PAS domain-containing protein; COG0591 Na+/proline symporter. | 0.999 |
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