Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ32833.1COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases. (1093 aa)    
Predicted Functional Partners:
EAQ32834.1
COG1451 Predicted metal-dependent hydrolase.
     0.947
EAQ32831.1
Putative type IC restriction-modification system specificity subunit; COG0732 Restriction endonuclease S subunits.
 
  
 0.939
EAQ32830.1
Putative type I site-specific deoxyribonuclease LldI chain protein; COG0286 Type I restriction-modification system methyltransferase subunit.
 
  
 0.926
EAQ31772.1
COG1451 Predicted metal-dependent hydrolase.
     0.779
EAQ32569.1
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
  
 0.684
EAQ32835.1
Hypothetical protein.
       0.671
EAQ32304.1
COG0286 Type I restriction-modification system methyltransferase subunit.
 
  
 0.645
EAQ32487.1
COG1451 Predicted metal-dependent hydrolase.
 
     0.603
EAQ32570.1
Putative specificity protein s; COG0732 Restriction endonuclease S subunits.
 
    0.526
EAQ32832.1
Hypothetical protein.
       0.477
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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