Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ32836.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
EAQ31001.1
COG0100 Ribosomal protein S11.
    
  0.869
EAQ30995.1
COG0098 Ribosomal protein S5.
    
  0.867
EAQ31002.1
COG0522 Ribosomal protein S4 and related proteins.
   
  0.861
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
  0.849
EAQ30975.1
COG0185 Ribosomal protein S19.
    
  0.845
rpsB
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
    
  0.822
EAQ32837.1
Hypothetical protein.
       0.805
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 0.804
EAQ30789.1
COG0051 Ribosomal protein S10.
   
  0.800
EAQ31000.1
COG0099 Ribosomal protein S13.
    
  0.795
Your Current Organism:
Idiomarina baltica
NCBI taxonomy Id: 314276
Other names: I. baltica OS145, Idiomarina baltica OS145, Idiomarina baltica str. OS145, Idiomarina baltica strain OS145
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